DOIONLINE

DOIONLINE NO - IJEEDC-IRAJ-DOIONLINE-170

Publish In
International Journal of Electrical, Electronics and Data Communication (IJEEDC)-IJEEDC
Journal Home
Volume Issue
Issue
Volume-1,Issue-4  ( Jun, 2013 )
Paper Title
Affect of Guide Trees on Multiple Sequence Alignment
Author Name
Gurudutt Upadhyay, Manoj Misra
Affilition
CSE Department, IIT Roorkee, India, CSE Department, IIT Roorkee, India
Pages
47-51
Abstract
n this paper we are proving that in context to the multiple sequence alignment formation of guide tree is an important step. Most MSA tools use guide trees to do alignment of multiple sequences. Here we have implemented an algorithm that generates guide trees given some sequences. These user generated guide trees are thenused to do multiple sequence alignment to study the impact of guide trees on MSA against already existing MSA tools. Weobserve that better guide trees can result in better alignment with improved accuracy
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